Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 AC024563.2-201ENST00000603282 481 ntBASIC16.4■□□□□ 0.22
TM9SF2Q99805 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
TM9SF2Q99805 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TM9SF2Q99805 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.39■□□□□ 0.22
TM9SF2Q99805 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.39■□□□□ 0.22
TM9SF2Q99805 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.39■□□□□ 0.22
TM9SF2Q99805 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
TM9SF2Q99805 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.39■□□□□ 0.21
TM9SF2Q99805 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 KRT126P-201ENST00000549467 1181 ntBASIC16.39■□□□□ 0.21
TM9SF2Q99805 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 AC008687.5-201ENST00000593746 558 ntBASIC16.39■□□□□ 0.21
TM9SF2Q99805 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.39■□□□□ 0.21
TM9SF2Q99805 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TM9SF2Q99805 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.38■□□□□ 0.21
TM9SF2Q99805 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF2Q99805 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF2Q99805 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF2Q99805 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
TM9SF2Q99805 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.38■□□□□ 0.21
TM9SF2Q99805 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF2Q99805 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF2Q99805 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TM9SF2Q99805 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TM9SF2Q99805 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF2Q99805 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TM9SF2Q99805 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF2Q99805 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TM9SF2Q99805 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms