Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NDNQ99608 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.72■□□□□ 0.43
NDNQ99608 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.72■□□□□ 0.43
NDNQ99608 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NDNQ99608 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NDNQ99608 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.72■□□□□ 0.43
NDNQ99608 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 LINC00304-203ENST00000565008 1864 ntBASIC17.72■□□□□ 0.43
NDNQ99608 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 AC133963.1-201ENST00000504166 1679 ntBASIC17.72■□□□□ 0.43
NDNQ99608 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.72■□□□□ 0.43
NDNQ99608 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NDNQ99608 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 IGHGP-201ENST00000390555 1178 ntBASIC17.72■□□□□ 0.43
NDNQ99608 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.72■□□□□ 0.43
NDNQ99608 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.72■□□□□ 0.43
NDNQ99608 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.72■□□□□ 0.43
NDNQ99608 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.72■□□□□ 0.43
NDNQ99608 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.72■□□□□ 0.43
NDNQ99608 HYMAI.1-201ENST00000620949 238 ntBASIC17.72■□□□□ 0.43
NDNQ99608 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NDNQ99608 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
NDNQ99608 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDNQ99608 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
NDNQ99608 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
NDNQ99608 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NDNQ99608 REXO1L11P-201ENST00000620964 1927 ntBASIC17.71■□□□□ 0.43
NDNQ99608 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NDNQ99608 MIR662-201ENST00000384847 95 ntBASIC17.71■□□□□ 0.43
NDNQ99608 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.71■□□□□ 0.43
NDNQ99608 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.71■□□□□ 0.43
NDNQ99608 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.71■□□□□ 0.43
NDNQ99608 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.43
NDNQ99608 RN7SL850P-201ENST00000579959 291 ntBASIC17.71■□□□□ 0.43
NDNQ99608 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.71■□□□□ 0.43
NDNQ99608 AC116407.2-201ENST00000613639 860 ntBASIC17.71■□□□□ 0.43
NDNQ99608 AC009154.2-201ENST00000621177 724 ntBASIC17.71■□□□□ 0.43
NDNQ99608 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
NDNQ99608 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.71■□□□□ 0.43
NDNQ99608 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 LINC01311-201ENST00000565162 1445 ntBASIC17.71■□□□□ 0.43
NDNQ99608 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
NDNQ99608 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NDNQ99608 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NDNQ99608 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 AL353692.3-201ENST00000407031 1396 ntBASIC17.7■□□□□ 0.42
NDNQ99608 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.7■□□□□ 0.42
NDNQ99608 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.7■□□□□ 0.42
NDNQ99608 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.7■□□□□ 0.42
NDNQ99608 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.7■□□□□ 0.42
NDNQ99608 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NDNQ99608 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.7■□□□□ 0.42
NDNQ99608 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NDNQ99608 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
NDNQ99608 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NDNQ99608 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
NDNQ99608 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NDNQ99608 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms