Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 RHOQP3-201ENST00000437982 621 ntBASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 FIS1-203ENST00000442303 631 ntTSL 3 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 CD63-210ENST00000550776 870 ntTSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 COX5A-206ENST00000568783 571 ntTSL 3 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 OR7E47P-204ENST00000575924 449 ntBASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 GGTLC5P-201ENST00000617623 998 ntBASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDK5RAP2Q96SN8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 PAWRP1-201ENST00000451083 565 ntBASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 PDPK2P-202ENST00000562415 1191 ntBASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDK5RAP2Q96SN8 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP2Q96SN8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.58■□□□□ 0.89
CDK5RAP2Q96SN8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP2Q96SN8 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
CDK5RAP2Q96SN8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.58■□□□□ 0.89
CDK5RAP2Q96SN8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP2Q96SN8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDK5RAP2Q96SN8 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 AC068137.2-201ENST00000605408 478 ntBASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 HNRNPRP1-201ENST00000453465 1695 ntBASIC20.58■□□□□ 0.88
CDK5RAP2Q96SN8 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 DNAJB3-201ENST00000446806 729 ntBASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 KRT19P2-202ENST00000557173 1012 ntBASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 AC027612.4-201ENST00000605371 583 ntBASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC20.57■□□□□ 0.88
CDK5RAP2Q96SN8 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 AC107918.2-201ENST00000530817 355 ntBASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDK5RAP2Q96SN8 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms