Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 GPR89P-201ENST00000407924 1495 ntBASIC20.5■□□□□ 0.87
CCDC17Q96LX7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 METTL26-205ENST00000397666 726 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 RPS15P9-201ENST00000494093 319 ntBASIC20.5■□□□□ 0.87
CCDC17Q96LX7 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 AL353135.1-201ENST00000606729 504 ntBASIC20.5■□□□□ 0.87
CCDC17Q96LX7 AC008667.4-201ENST00000607370 168 ntBASIC20.5■□□□□ 0.87
CCDC17Q96LX7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC17Q96LX7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 KRT18P13-201ENST00000400056 1290 ntBASIC20.49■□□□□ 0.87
CCDC17Q96LX7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 LINC00982-205ENST00000420957 435 ntBASIC20.49■□□□□ 0.87
CCDC17Q96LX7 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 HS6ST1P1-201ENST00000481504 1234 ntBASIC20.49■□□□□ 0.87
CCDC17Q96LX7 IGHV3-65-201ENST00000523210 341 ntBASIC20.49■□□□□ 0.87
CCDC17Q96LX7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC17Q96LX7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 ACTG1P4-201ENST00000425123 1122 ntBASIC20.48■□□□□ 0.87
CCDC17Q96LX7 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 RNA5SP416-201ENST00000516838 111 ntBASIC20.48■□□□□ 0.87
CCDC17Q96LX7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 TCAP-202ENST00000578283 583 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 AL805961.1-202ENST00000641562 540 ntBASIC20.48■□□□□ 0.87
CCDC17Q96LX7 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC17Q96LX7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC17Q96LX7 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC17Q96LX7 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC17Q96LX7 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC17Q96LX7 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC17Q96LX7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms