Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.57■□□□□ 0.08
AP3S1Q92572 POM121L13P-201ENST00000422362 380 ntBASIC15.57■□□□□ 0.08
AP3S1Q92572 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.57■□□□□ 0.08
AP3S1Q92572 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
AP3S1Q92572 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
AP3S1Q92572 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP3S1Q92572 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
AP3S1Q92572 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.57■□□□□ 0.08
AP3S1Q92572 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
AP3S1Q92572 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 AL513523.2-202ENST00000427283 2040 ntBASIC15.56■□□□□ 0.08
AP3S1Q92572 AC006449.5-201ENST00000610658 2098 ntBASIC15.56■□□□□ 0.08
AP3S1Q92572 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3S1Q92572 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
AP3S1Q92572 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3S1Q92572 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3S1Q92572 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.56■□□□□ 0.08
AP3S1Q92572 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 AC036111.1-201ENST00000533973 1582 ntBASIC15.56■□□□□ 0.08
AP3S1Q92572 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.56■□□□□ 0.08
AP3S1Q92572 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
AP3S1Q92572 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.55■□□□□ 0.08
AP3S1Q92572 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S1Q92572 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 AC004911.1-201ENST00000416316 871 ntBASIC15.55■□□□□ 0.08
AP3S1Q92572 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC15.55■□□□□ 0.08
AP3S1Q92572 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S1Q92572 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.55■□□□□ 0.08
AP3S1Q92572 AC008622.2-201ENST00000617006 1229 ntBASIC15.55■□□□□ 0.08
AP3S1Q92572 MYC-209ENST00000641252 345 ntBASIC15.55■□□□□ 0.08
AP3S1Q92572 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
AP3S1Q92572 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.55■□□□□ 0.08
AP3S1Q92572 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 AC103702.1-201ENST00000548801 2630 ntBASIC15.55■□□□□ 0.08
AP3S1Q92572 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
AP3S1Q92572 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms