Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 FAM8A6P-201ENST00000407496 1135 ntBASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 AC009947.2-201ENST00000444014 672 ntBASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 HOMER2P1-201ENST00000455653 964 ntBASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 DUTP2-201ENST00000519164 463 ntBASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 CR769767.2-201ENST00000622735 460 ntBASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 GPAT2P1-201ENST00000444924 1672 ntBASIC15.54■□□□□ 0.08
RAB40AQ8WXH6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 AL023973.1-201ENST00000624619 620 ntBASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB40AQ8WXH6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 GAD2-202ENST00000376248 680 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 HLA-J-201ENST00000462773 1622 ntBASIC15.52■□□□□ 0.08
RAB40AQ8WXH6 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB40AQ8WXH6 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms