Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 AC004449.1-201ENST00000564240 433 ntBASIC21.28■■□□□ 1
SNED1Q8TER0 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
SNED1Q8TER0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.28■■□□□ 1
SNED1Q8TER0 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.28■■□□□ 1
SNED1Q8TER0 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.27■■□□□ 1
SNED1Q8TER0 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
SNED1Q8TER0 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
SNED1Q8TER0 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.27■■□□□ 1
SNED1Q8TER0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC21.27■■□□□ 1
SNED1Q8TER0 SLC25A6P2-201ENST00000497974 877 ntBASIC21.27■■□□□ 1
SNED1Q8TER0 AC051619.7-201ENST00000568314 623 ntBASIC21.27■■□□□ 1
SNED1Q8TER0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.27■■□□□ 1
SNED1Q8TER0 MIR4745-201ENST00000577608 62 ntBASIC21.27■■□□□ 1
SNED1Q8TER0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC21.27■■□□□ 1
SNED1Q8TER0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
SNED1Q8TER0 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SNED1Q8TER0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SNED1Q8TER0 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 COPE-202ENST00000349893 948 ntTSL 2 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
SNED1Q8TER0 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC21.26■□□□□ 0.99
SNED1Q8TER0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNED1Q8TER0 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNED1Q8TER0 AC093677.2-201ENST00000600169 1863 ntBASIC21.25■□□□□ 0.99
SNED1Q8TER0 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNED1Q8TER0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNED1Q8TER0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 GPS2P2-201ENST00000430745 888 ntBASIC21.25■□□□□ 0.99
SNED1Q8TER0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 AC025678.2-201ENST00000562061 970 ntBASIC21.25■□□□□ 0.99
SNED1Q8TER0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNED1Q8TER0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 AL138781.2-201ENST00000617896 1843 ntBASIC21.25■□□□□ 0.99
SNED1Q8TER0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC21.25■□□□□ 0.99
SNED1Q8TER0 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SNED1Q8TER0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SNED1Q8TER0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.24■□□□□ 0.99
SNED1Q8TER0 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNED1Q8TER0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC21.24■□□□□ 0.99
SNED1Q8TER0 PI4KAP1-204ENST00000612579 1703 ntBASIC21.24■□□□□ 0.99
SNED1Q8TER0 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNED1Q8TER0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNED1Q8TER0 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
SNED1Q8TER0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SNED1Q8TER0 HLA-DRB6-201ENST00000411500 1235 ntBASIC21.24■□□□□ 0.99
SNED1Q8TER0 KRT8P48-201ENST00000515599 1220 ntBASIC21.24■□□□□ 0.99
SNED1Q8TER0 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms