Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.96■□□□□ 0.63
BEST2Q8NFU1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 RNPS1P1-201ENST00000507437 918 ntBASIC18.96■□□□□ 0.63
BEST2Q8NFU1 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.96■□□□□ 0.63
BEST2Q8NFU1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 AC003669.1-201ENST00000334569 611 ntBASIC18.95■□□□□ 0.62
BEST2Q8NFU1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 MYCLP1-201ENST00000372451 1075 ntBASIC18.95■□□□□ 0.62
BEST2Q8NFU1 KLF4P1-201ENST00000412782 1185 ntBASIC18.95■□□□□ 0.62
BEST2Q8NFU1 SPDYE21P-201ENST00000413323 827 ntBASIC18.95■□□□□ 0.62
BEST2Q8NFU1 AC005104.2-201ENST00000427818 678 ntBASIC18.95■□□□□ 0.62
BEST2Q8NFU1 AC018712.1-201ENST00000455767 687 ntBASIC18.95■□□□□ 0.62
BEST2Q8NFU1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 AC021087.4-201ENST00000563761 564 ntBASIC18.95■□□□□ 0.62
BEST2Q8NFU1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 AC073592.4-201ENST00000623827 446 ntBASIC18.95■□□□□ 0.62
BEST2Q8NFU1 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
BEST2Q8NFU1 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 SIGLEC16-201ENST00000599858 1437 ntBASIC18.94■□□□□ 0.62
BEST2Q8NFU1 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 AL020989.1-201ENST00000422979 469 ntBASIC18.94■□□□□ 0.62
BEST2Q8NFU1 BX005266.1-201ENST00000473402 457 ntBASIC18.94■□□□□ 0.62
BEST2Q8NFU1 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 BX640515.1-201ENST00000617215 977 ntBASIC18.94■□□□□ 0.62
BEST2Q8NFU1 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 AC132938.5-201ENST00000624980 1813 ntBASIC18.94■□□□□ 0.62
BEST2Q8NFU1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
BEST2Q8NFU1 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms