Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 AC005104.2-201ENST00000427818 678 ntBASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 PRELID1P1-202ENST00000567272 903 ntBASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 LINC00304-203ENST00000565008 1864 ntBASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CCDC148Q8NFR7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 REXO1L11P-201ENST00000620964 1927 ntBASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 AC103564.2-201ENST00000432853 1299 ntBASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 KRT18P56-201ENST00000507275 550 ntBASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.33■□□□□ 0.85
CCDC148Q8NFR7 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CCDC148Q8NFR7 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CCDC148Q8NFR7 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC148Q8NFR7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CCDC148Q8NFR7 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.33■□□□□ 0.84
CCDC148Q8NFR7 INTS4P1-201ENST00000438455 1935 ntBASIC20.33■□□□□ 0.84
CCDC148Q8NFR7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC148Q8NFR7 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CCDC148Q8NFR7 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 RCN1P2-201ENST00000398357 915 ntBASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 AC002558.1-201ENST00000488906 803 ntBASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 AC133963.1-201ENST00000504166 1679 ntBASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CCDC148Q8NFR7 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 HLA-J-201ENST00000462773 1622 ntBASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 AL355312.1-201ENST00000407115 2176 ntBASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 FOSL1P1-201ENST00000511041 816 ntBASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CCDC148Q8NFR7 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC20.3■□□□□ 0.84
CCDC148Q8NFR7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms