Protein–RNA interactions for Protein: Q86WJ1

CHD1L, Chromodomain-helicase-DNA-binding protein 1-like, humanhuman

Predictions only

Length 897 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1LQ86WJ1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 KRT8P26-201ENST00000534154 1276 ntBASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 AC090616.6-201ENST00000582640 721 ntBASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 AL138831.2-201ENST00000606564 490 ntBASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 AC019129.2-201ENST00000609837 1235 ntBASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 AD000864.1-201ENST00000624076 2295 ntBASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
CHD1LQ86WJ1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 IGHV3-41-201ENST00000613121 348 ntBASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CHD1LQ86WJ1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 BCL2-203ENST00000589955 5011 ntBASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 AL121956.5-201ENST00000625261 221 ntBASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 AC005332.1-201ENST00000577698 1310 ntBASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC21.76■■□□□ 1.07
CHD1LQ86WJ1 AC116353.5-201ENST00000638148 1699 ntBASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 AC090340.1-201ENST00000620778 4980 ntBASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 FAM86EP-206ENST00000510506 987 ntBASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CHD1LQ86WJ1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 NF2-208ENST00000403435 2568 ntTSL 5 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CHD1LQ86WJ1 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms