Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13CQ709C8 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.57□□□□□ -0.08
VPS13CQ709C8 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13CQ709C8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13CQ709C8 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13CQ709C8 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13CQ709C8 GPS2P2-201ENST00000430745 888 ntBASIC14.57□□□□□ -0.08
VPS13CQ709C8 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS13CQ709C8 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC14.57□□□□□ -0.08
VPS13CQ709C8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
VPS13CQ709C8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
VPS13CQ709C8 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
VPS13CQ709C8 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 NME2P1-201ENST00000426182 414 ntBASIC14.56□□□□□ -0.08
VPS13CQ709C8 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 TUBB3P1-201ENST00000405796 1332 ntBASIC14.56□□□□□ -0.08
VPS13CQ709C8 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 OR8S1-201ENST00000310194 1080 ntBASIC14.56□□□□□ -0.08
VPS13CQ709C8 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 SERBP1P5-201ENST00000510079 1181 ntBASIC14.56□□□□□ -0.08
VPS13CQ709C8 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 AC019129.2-201ENST00000609837 1235 ntBASIC14.56□□□□□ -0.08
VPS13CQ709C8 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 AC009093.7-201ENST00000623853 1223 ntBASIC14.56□□□□□ -0.08
VPS13CQ709C8 AC025048.6-201ENST00000634326 1161 ntBASIC14.56□□□□□ -0.08
VPS13CQ709C8 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
VPS13CQ709C8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC14.56□□□□□ -0.08
VPS13CQ709C8 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 RNA5SP421-201ENST00000516864 134 ntBASIC14.55□□□□□ -0.08
VPS13CQ709C8 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 AC097637.2-201ENST00000624096 1997 ntBASIC14.55□□□□□ -0.08
VPS13CQ709C8 FAM207CP-201ENST00000443486 507 ntBASIC14.55□□□□□ -0.08
VPS13CQ709C8 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 AC004449.1-201ENST00000564240 433 ntBASIC14.55□□□□□ -0.08
VPS13CQ709C8 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
VPS13CQ709C8 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.55□□□□□ -0.08
VPS13CQ709C8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13CQ709C8 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC14.54□□□□□ -0.08
VPS13CQ709C8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms