Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.84■□□□□ 0.61
CNKSR3Q6P9H4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.83■□□□□ 0.61
CNKSR3Q6P9H4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.83■□□□□ 0.61
CNKSR3Q6P9H4 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
CNKSR3Q6P9H4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CNKSR3Q6P9H4 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CNKSR3Q6P9H4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 ADH5P3-201ENST00000433842 1137 ntBASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 AC005498.2-205ENST00000593218 784 ntBASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CNKSR3Q6P9H4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CNKSR3Q6P9H4 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 AC002056.1-201ENST00000395613 760 ntBASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CNKSR3Q6P9H4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms