Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 RPS2P1-201ENST00000434010 821 ntBASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 OR7E14P-202ENST00000530490 1290 ntBASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 AC116407.3-201ENST00000623905 1129 ntBASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
H3F3CQ6NXT2 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 SPDYE21P-201ENST00000413323 827 ntBASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 AL671883.3-201ENST00000603274 991 ntBASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 AC107918.4-202ENST00000641623 219 ntBASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 AF228730.7-201ENST00000641842 219 ntBASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
H3F3CQ6NXT2 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 REXO1L9P-201ENST00000604264 2108 ntBASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 AC100803.2-201ENST00000562459 1963 ntBASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 AC106730.1-201ENST00000566722 1090 ntBASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 AC008735.5-201ENST00000623544 497 ntBASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 AC073592.5-201ENST00000624854 528 ntBASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 AL022326.1-202ENST00000641533 845 ntBASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 FLJ13224-201ENST00000313737 1514 ntBASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 BX276092.7-203ENST00000637198 1536 ntBASIC16.28■□□□□ 0.2
H3F3CQ6NXT2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms