Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC17.05■□□□□ 0.32
RNF220Q5VTB9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 AC026691.1-201ENST00000602502 2017 ntBASIC17.04■□□□□ 0.32
RNF220Q5VTB9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 TSPY17P-201ENST00000450329 467 ntBASIC17.04■□□□□ 0.32
RNF220Q5VTB9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 FITM1-202ENST00000559294 800 ntBASIC17.04■□□□□ 0.32
RNF220Q5VTB9 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 AP006294.2-201ENST00000641667 209 ntBASIC17.04■□□□□ 0.32
RNF220Q5VTB9 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 KRT8P50-201ENST00000562022 1438 ntBASIC17.04■□□□□ 0.32
RNF220Q5VTB9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RNF220Q5VTB9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 AL353719.1-201ENST00000566847 864 ntBASIC17.03■□□□□ 0.32
RNF220Q5VTB9 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.03■□□□□ 0.32
RNF220Q5VTB9 AC036111.1-201ENST00000533973 1582 ntBASIC17.02■□□□□ 0.32
RNF220Q5VTB9 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 CCR12P-201ENST00000446203 998 ntBASIC17.02■□□□□ 0.32
RNF220Q5VTB9 AP003041.3-201ENST00000527151 707 ntBASIC17.02■□□□□ 0.32
RNF220Q5VTB9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 AP000525.1-201ENST00000608286 694 ntBASIC17.02■□□□□ 0.32
RNF220Q5VTB9 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.02■□□□□ 0.32
RNF220Q5VTB9 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RNF220Q5VTB9 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.02■□□□□ 0.31
RNF220Q5VTB9 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms