Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AC099336.1-201ENST00000417053 1171 ntBASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 KRT8P13-201ENST00000463294 1010 ntBASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 RNA5SP412-201ENST00000516234 123 ntBASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AP000842.3-202ENST00000569238 1080 ntBASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AL365330.1-201ENST00000607459 531 ntBASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AL645728.2-201ENST00000641974 660 ntBASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
COL13A1Q5TAT6 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 FUT8-AS1-201ENST00000621019 1521 ntBASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
COL13A1Q5TAT6 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AC114501.2-201ENST00000439631 535 ntBASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AC114501.1-201ENST00000445949 172 ntBASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 CTBP2P5-201ENST00000454986 1264 ntBASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
COL13A1Q5TAT6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 AC105129.2-201ENST00000559536 390 ntBASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 AC004790.1-201ENST00000612686 536 ntBASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 AC148477.9-201ENST00000623974 539 ntBASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL13A1Q5TAT6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
COL13A1Q5TAT6 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms