Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PDSS1Q5T2R2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.06■□□□□ 0.16
PDSS1Q5T2R2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.06■□□□□ 0.16
PDSS1Q5T2R2 BICD1-207ENST00000551848 1962 ntBASIC16.06■□□□□ 0.16
PDSS1Q5T2R2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PDSS1Q5T2R2 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 NFIC-211ENST00000641145 8399 ntBASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 AL121772.3-201ENST00000610840 674 ntBASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.05■□□□□ 0.16
PDSS1Q5T2R2 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 NSUN5P1-202ENST00000421140 1535 ntBASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 NSUN5P2-203ENST00000457352 1529 ntBASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 AC099336.1-202ENST00000602961 463 ntBASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.04■□□□□ 0.16
PDSS1Q5T2R2 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 AC138028.4-201ENST00000564984 1845 ntBASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 AC097374.2-201ENST00000618617 1306 ntBASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDSS1Q5T2R2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms