Protein–RNA interactions for Protein: Q00403

GTF2B, Transcription initiation factor IIB, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2BQ00403 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC19.23■□□□□ 0.67
GTF2BQ00403 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.23■□□□□ 0.67
GTF2BQ00403 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC19.23■□□□□ 0.67
GTF2BQ00403 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.23■□□□□ 0.67
GTF2BQ00403 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.23■□□□□ 0.67
GTF2BQ00403 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.23■□□□□ 0.67
GTF2BQ00403 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.23■□□□□ 0.67
GTF2BQ00403 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.23■□□□□ 0.67
GTF2BQ00403 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2BQ00403 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.23■□□□□ 0.67
GTF2BQ00403 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
GTF2BQ00403 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2BQ00403 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2BQ00403 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2BQ00403 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2BQ00403 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
GTF2BQ00403 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
GTF2BQ00403 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.23■□□□□ 0.67
GTF2BQ00403 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2BQ00403 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
GTF2BQ00403 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF2BQ00403 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
GTF2BQ00403 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
GTF2BQ00403 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.22■□□□□ 0.67
GTF2BQ00403 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2BQ00403 KLF4P1-201ENST00000412782 1185 ntBASIC19.22■□□□□ 0.67
GTF2BQ00403 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF2BQ00403 EMBP1-201ENST00000458200 901 ntBASIC19.22■□□□□ 0.67
GTF2BQ00403 STK19B-204ENST00000512515 211 ntBASIC19.22■□□□□ 0.67
GTF2BQ00403 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
GTF2BQ00403 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.22■□□□□ 0.67
GTF2BQ00403 MTDHP3-201ENST00000594186 672 ntBASIC19.22■□□□□ 0.67
GTF2BQ00403 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF2BQ00403 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF2BQ00403 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GTF2BQ00403 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC19.22■□□□□ 0.67
GTF2BQ00403 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GTF2BQ00403 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.22■□□□□ 0.67
GTF2BQ00403 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2BQ00403 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
GTF2BQ00403 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GTF2BQ00403 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2BQ00403 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2BQ00403 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2BQ00403 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.21■□□□□ 0.67
GTF2BQ00403 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
GTF2BQ00403 FGFR3P6-201ENST00000457012 610 ntBASIC19.21■□□□□ 0.67
GTF2BQ00403 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 RN7SL510P-201ENST00000581311 263 ntBASIC19.21■□□□□ 0.67
GTF2BQ00403 AC008608.2-201ENST00000606089 416 ntBASIC19.21■□□□□ 0.67
GTF2BQ00403 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GTF2BQ00403 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.21■□□□□ 0.67
GTF2BQ00403 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.21■□□□□ 0.67
GTF2BQ00403 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
GTF2BQ00403 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GTF2BQ00403 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GTF2BQ00403 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2BQ00403 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.2■□□□□ 0.66
GTF2BQ00403 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2BQ00403 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.2■□□□□ 0.66
GTF2BQ00403 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GTF2BQ00403 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2BQ00403 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 AL020989.1-201ENST00000422979 469 ntBASIC19.2■□□□□ 0.66
GTF2BQ00403 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2BQ00403 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.2■□□□□ 0.66
GTF2BQ00403 AL691432.3-201ENST00000621860 400 ntBASIC19.2■□□□□ 0.66
GTF2BQ00403 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 AC148477.5-201ENST00000625164 1645 ntBASIC19.2■□□□□ 0.66
GTF2BQ00403 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.2■□□□□ 0.66
GTF2BQ00403 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GTF2BQ00403 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms