Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 LYSMD4-203ENST00000378904 2122 ntBASIC15.42■□□□□ 0.06
HIST1H3AP68431 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 AC019129.2-201ENST00000609837 1235 ntBASIC15.42■□□□□ 0.06
HIST1H3AP68431 AL139327.4-201ENST00000612362 153 ntBASIC15.42■□□□□ 0.06
HIST1H3AP68431 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
HIST1H3AP68431 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
HIST1H3AP68431 CROCCP2-202ENST00000412962 2773 ntBASIC15.41■□□□□ 0.06
HIST1H3AP68431 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 PCED1CP-201ENST00000419887 785 ntBASIC15.41■□□□□ 0.06
HIST1H3AP68431 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 DBP-204ENST00000599385 709 ntTSL 3 BASIC15.41■□□□□ 0.06
HIST1H3AP68431 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 AC016396.2-201ENST00000562575 1417 ntBASIC15.41■□□□□ 0.06
HIST1H3AP68431 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
HIST1H3AP68431 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 EML3-212ENST00000494176 2901 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 EML3-216ENST00000529309 2909 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 MEG3-211ENST00000452514 461 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
HIST1H3AP68431 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
HIST1H3AP68431 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms