Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.8■□□□□ 0.76
TPM4P67936 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.8■□□□□ 0.76
TPM4P67936 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
TPM4P67936 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
TPM4P67936 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.8■□□□□ 0.76
TPM4P67936 AC046158.3-201ENST00000624947 2558 ntBASIC19.8■□□□□ 0.76
TPM4P67936 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TPM4P67936 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.79■□□□□ 0.76
TPM4P67936 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 LINC00167-201ENST00000530583 1419 ntBASIC19.79■□□□□ 0.76
TPM4P67936 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TPM4P67936 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.79■□□□□ 0.76
TPM4P67936 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 KRT18P29-201ENST00000397031 1267 ntBASIC19.79■□□□□ 0.76
TPM4P67936 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.79■□□□□ 0.76
TPM4P67936 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TPM4P67936 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.79■□□□□ 0.76
TPM4P67936 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TPM4P67936 AC116562.4-202ENST00000641738 218 ntBASIC19.79■□□□□ 0.76
TPM4P67936 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.79■□□□□ 0.76
TPM4P67936 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TPM4P67936 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TPM4P67936 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
TPM4P67936 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TPM4P67936 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TPM4P67936 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
TPM4P67936 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
TPM4P67936 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TPM4P67936 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.78■□□□□ 0.76
TPM4P67936 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.78■□□□□ 0.76
TPM4P67936 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
TPM4P67936 RPS2P55-201ENST00000397318 883 ntBASIC19.78■□□□□ 0.76
TPM4P67936 AC107956.1-201ENST00000494359 873 ntBASIC19.78■□□□□ 0.76
TPM4P67936 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.78■□□□□ 0.76
TPM4P67936 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC19.78■□□□□ 0.76
TPM4P67936 CD99P1-205ENST00000527459 561 ntBASIC19.78■□□□□ 0.76
TPM4P67936 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.78■□□□□ 0.76
TPM4P67936 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TPM4P67936 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TPM4P67936 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TPM4P67936 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC19.78■□□□□ 0.76
TPM4P67936 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
TPM4P67936 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TPM4P67936 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 AC016396.2-201ENST00000562575 1417 ntBASIC19.77■□□□□ 0.76
TPM4P67936 AC092338.2-201ENST00000568827 1415 ntBASIC19.77■□□□□ 0.76
TPM4P67936 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.77■□□□□ 0.76
TPM4P67936 REXO1L11P-201ENST00000620964 1927 ntBASIC19.77■□□□□ 0.76
TPM4P67936 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.77■□□□□ 0.76
TPM4P67936 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.77■□□□□ 0.76
TPM4P67936 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
TPM4P67936 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
TPM4P67936 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.77■□□□□ 0.76
TPM4P67936 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.77■□□□□ 0.76
TPM4P67936 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TPM4P67936 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TPM4P67936 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TPM4P67936 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
TPM4P67936 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC19.76■□□□□ 0.75
TPM4P67936 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms