Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 BICD1-207ENST00000551848 1962 ntBASIC14.42□□□□□ -0.1
LMO4P61968 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LMO4P61968 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
LMO4P61968 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
LMO4P61968 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO4P61968 PTCHD3P3-201ENST00000403073 906 ntBASIC14.42□□□□□ -0.1
LMO4P61968 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO4P61968 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.42□□□□□ -0.1
LMO4P61968 HNRNPA1P28-201ENST00000424481 961 ntBASIC14.42□□□□□ -0.1
LMO4P61968 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO4P61968 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO4P61968 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO4P61968 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO4P61968 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.42□□□□□ -0.1
LMO4P61968 MIR3687-2-201ENST00000577708 61 ntBASIC14.42□□□□□ -0.1
LMO4P61968 MIR4751-201ENST00000578027 74 ntBASIC14.42□□□□□ -0.1
LMO4P61968 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.42□□□□□ -0.1
LMO4P61968 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO4P61968 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO4P61968 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO4P61968 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.42□□□□□ -0.1
LMO4P61968 MIR3687-1-201ENST00000614492 61 ntBASIC14.42□□□□□ -0.1
LMO4P61968 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LMO4P61968 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
LMO4P61968 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC14.42□□□□□ -0.1
LMO4P61968 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 REXO1L11P-201ENST00000620964 1927 ntBASIC14.42□□□□□ -0.1
LMO4P61968 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
LMO4P61968 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.42□□□□□ -0.1
LMO4P61968 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO4P61968 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO4P61968 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
LMO4P61968 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.42□□□□□ -0.1
LMO4P61968 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC14.41□□□□□ -0.1
LMO4P61968 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC14.41□□□□□ -0.1
LMO4P61968 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
LMO4P61968 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
LMO4P61968 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.41□□□□□ -0.1
LMO4P61968 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 HCG4B-203ENST00000450128 991 ntBASIC14.41□□□□□ -0.1
LMO4P61968 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.41□□□□□ -0.1
LMO4P61968 MTDHP5-201ENST00000598980 586 ntBASIC14.41□□□□□ -0.1
LMO4P61968 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.41□□□□□ -0.1
LMO4P61968 AL691403.2-201ENST00000618460 490 ntBASIC14.41□□□□□ -0.1
LMO4P61968 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
LMO4P61968 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.41□□□□□ -0.1
LMO4P61968 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.41□□□□□ -0.1
LMO4P61968 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
LMO4P61968 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO4P61968 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LMO4P61968 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO4P61968 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
LMO4P61968 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
LMO4P61968 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO4P61968 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO4P61968 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO4P61968 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO4P61968 ENSA-206ENST00000361631 725 ntTSL 2 BASIC14.4□□□□□ -0.1
LMO4P61968 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LMO4P61968 AP002414.1-201ENST00000391405 1147 ntBASIC14.4□□□□□ -0.1
LMO4P61968 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms