Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.15■□□□□ 0.18
CDC42P60953 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC42P60953 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDC42P60953 NUDT16P1-203ENST00000513809 620 ntBASIC16.15■□□□□ 0.18
CDC42P60953 RPPH1-201ENST00000516869 333 ntBASIC16.15■□□□□ 0.18
CDC42P60953 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
CDC42P60953 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.15■□□□□ 0.18
CDC42P60953 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.15■□□□□ 0.18
CDC42P60953 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.15■□□□□ 0.18
CDC42P60953 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
CDC42P60953 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDC42P60953 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
CDC42P60953 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDC42P60953 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDC42P60953 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
CDC42P60953 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
CDC42P60953 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.15■□□□□ 0.18
CDC42P60953 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
CDC42P60953 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.18
CDC42P60953 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
CDC42P60953 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
CDC42P60953 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 LINC00167-201ENST00000530583 1419 ntBASIC16.14■□□□□ 0.17
CDC42P60953 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDC42P60953 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.14■□□□□ 0.17
CDC42P60953 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
CDC42P60953 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.14■□□□□ 0.17
CDC42P60953 TSPY17P-201ENST00000450329 467 ntBASIC16.14■□□□□ 0.17
CDC42P60953 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CDC42P60953 CD99P1-205ENST00000527459 561 ntBASIC16.14■□□□□ 0.17
CDC42P60953 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.14■□□□□ 0.17
CDC42P60953 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
CDC42P60953 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.14■□□□□ 0.17
CDC42P60953 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
CDC42P60953 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
CDC42P60953 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.14■□□□□ 0.17
CDC42P60953 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.13■□□□□ 0.17
CDC42P60953 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
CDC42P60953 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 AC060834.1-201ENST00000443027 2032 ntBASIC16.13■□□□□ 0.17
CDC42P60953 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC16.13■□□□□ 0.17
CDC42P60953 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CDC42P60953 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC16.13■□□□□ 0.17
CDC42P60953 AC128676.1-201ENST00000454392 318 ntBASIC16.13■□□□□ 0.17
CDC42P60953 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
CDC42P60953 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms