Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 REXO1L12P-201ENST00000622156 912 ntBASIC15.37■□□□□ 0.05
CLDN12P56749 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.37■□□□□ 0.05
CLDN12P56749 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CLDN12P56749 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.37■□□□□ 0.05
CLDN12P56749 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CLDN12P56749 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CLDN12P56749 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
CLDN12P56749 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLDN12P56749 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN12P56749 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.36■□□□□ 0.05
CLDN12P56749 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDN12P56749 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDN12P56749 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.36■□□□□ 0.05
CLDN12P56749 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 AL023803.3-201ENST00000615559 522 ntBASIC15.36■□□□□ 0.05
CLDN12P56749 AL359736.2-201ENST00000621992 437 ntBASIC15.36■□□□□ 0.05
CLDN12P56749 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN12P56749 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
CLDN12P56749 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CLDN12P56749 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
CLDN12P56749 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CLDN12P56749 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN12P56749 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.36■□□□□ 0.05
CLDN12P56749 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CLDN12P56749 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
CLDN12P56749 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN12P56749 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
CLDN12P56749 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN12P56749 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
CLDN12P56749 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN12P56749 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
CLDN12P56749 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 ID1-201ENST00000376105 1233 ntBASIC15.35■□□□□ 0.05
CLDN12P56749 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CLDN12P56749 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN12P56749 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN12P56749 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN12P56749 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.35■□□□□ 0.05
CLDN12P56749 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.35■□□□□ 0.05
CLDN12P56749 AL353719.1-201ENST00000566847 864 ntBASIC15.35■□□□□ 0.05
CLDN12P56749 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 MIR4651-201ENST00000582622 73 ntBASIC15.35■□□□□ 0.05
CLDN12P56749 GRAMD4P8-201ENST00000605465 1115 ntBASIC15.35■□□□□ 0.05
CLDN12P56749 AC116407.2-201ENST00000613639 860 ntBASIC15.35■□□□□ 0.05
CLDN12P56749 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.35■□□□□ 0.05
CLDN12P56749 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CLDN12P56749 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.35■□□□□ 0.05
CLDN12P56749 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
CLDN12P56749 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CLDN12P56749 DOC2GP-204ENST00000639052 2548 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms