Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PKD1P5-201ENST00000532415 10291 ntBASIC13.15□□□□□ -0.31
CMC4P56277 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC13.15□□□□□ -0.31
CMC4P56277 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC13.15□□□□□ -0.31
CMC4P56277 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
CMC4P56277 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.14□□□□□ -0.31
CMC4P56277 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC13.14□□□□□ -0.31
CMC4P56277 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
CMC4P56277 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 AC009949.1-201ENST00000623048 1830 ntBASIC13.14□□□□□ -0.31
CMC4P56277 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.14□□□□□ -0.31
CMC4P56277 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
CMC4P56277 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC13.14□□□□□ -0.31
CMC4P56277 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC13.14□□□□□ -0.31
CMC4P56277 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.14□□□□□ -0.31
CMC4P56277 ABCD1P5-201ENST00000445663 754 ntBASIC13.14□□□□□ -0.31
CMC4P56277 SCARNA2-201ENST00000458748 420 ntBASIC13.14□□□□□ -0.31
CMC4P56277 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.14□□□□□ -0.31
CMC4P56277 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.14□□□□□ -0.31
CMC4P56277 BET1L-206ENST00000486280 665 ntTSL 3 BASIC13.14□□□□□ -0.31
CMC4P56277 AC091607.1-201ENST00000490318 1060 ntBASIC13.14□□□□□ -0.31
CMC4P56277 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
CMC4P56277 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC13.14□□□□□ -0.31
CMC4P56277 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
CMC4P56277 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
CMC4P56277 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 AC003669.1-201ENST00000334569 611 ntBASIC13.13□□□□□ -0.31
CMC4P56277 DFFB-203ENST00000341385 572 ntTSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.13□□□□□ -0.31
CMC4P56277 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.13□□□□□ -0.31
CMC4P56277 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.13□□□□□ -0.31
CMC4P56277 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC13.13□□□□□ -0.31
CMC4P56277 TPM4P1-201ENST00000436100 807 ntBASIC13.13□□□□□ -0.31
CMC4P56277 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 FAAHP1-202ENST00000446499 1238 ntBASIC13.13□□□□□ -0.31
CMC4P56277 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC13.13□□□□□ -0.31
CMC4P56277 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC13.13□□□□□ -0.31
CMC4P56277 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC13.13□□□□□ -0.31
CMC4P56277 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.13□□□□□ -0.31
CMC4P56277 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC13.13□□□□□ -0.31
CMC4P56277 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC13.13□□□□□ -0.31
CMC4P56277 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.13□□□□□ -0.31
CMC4P56277 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CMC4P56277 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CMC4P56277 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms