Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.31■□□□□ 0.36
CLCNKAP51800 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCNKAP51800 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCNKAP51800 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 PMPCAP1-201ENST00000508114 1576 ntBASIC17.31■□□□□ 0.36
CLCNKAP51800 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCNKAP51800 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCNKAP51800 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCNKAP51800 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLCNKAP51800 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCNKAP51800 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLCNKAP51800 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLCNKAP51800 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLCNKAP51800 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCNKAP51800 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCNKAP51800 AC009078.2-202ENST00000463353 338 ntBASIC17.3■□□□□ 0.36
CLCNKAP51800 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCNKAP51800 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.3■□□□□ 0.36
CLCNKAP51800 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.3■□□□□ 0.36
CLCNKAP51800 SLC25A6P4-201ENST00000586535 553 ntBASIC17.3■□□□□ 0.36
CLCNKAP51800 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.3■□□□□ 0.36
CLCNKAP51800 TP73-AS1-207ENST00000624167 988 ntBASIC17.3■□□□□ 0.36
CLCNKAP51800 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCNKAP51800 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCNKAP51800 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCNKAP51800 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCNKAP51800 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CLCNKAP51800 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCNKAP51800 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CLCNKAP51800 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
CLCNKAP51800 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLCNKAP51800 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLCNKAP51800 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.29■□□□□ 0.36
CLCNKAP51800 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCNKAP51800 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCNKAP51800 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 SLC25A6P5-201ENST00000435663 894 ntBASIC17.29■□□□□ 0.36
CLCNKAP51800 FAM197Y8-203ENST00000450145 560 ntBASIC17.29■□□□□ 0.36
CLCNKAP51800 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.29■□□□□ 0.36
CLCNKAP51800 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCNKAP51800 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCNKAP51800 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCNKAP51800 AL139288.1-201ENST00000623748 933 ntBASIC17.29■□□□□ 0.36
CLCNKAP51800 AC073592.4-201ENST00000623827 446 ntBASIC17.29■□□□□ 0.36
CLCNKAP51800 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCNKAP51800 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 SIRPAP1-201ENST00000448467 1770 ntBASIC17.29■□□□□ 0.36
CLCNKAP51800 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.29■□□□□ 0.36
CLCNKAP51800 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 AL353593.2-201ENST00000602529 1483 ntBASIC17.29■□□□□ 0.36
CLCNKAP51800 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.29■□□□□ 0.36
CLCNKAP51800 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLCNKAP51800 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms