Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 PTCHD3P3-201ENST00000403073 906 ntBASIC19.42■□□□□ 0.7
CDK7P50613 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.42■□□□□ 0.7
CDK7P50613 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC19.42■□□□□ 0.7
CDK7P50613 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC19.42■□□□□ 0.7
CDK7P50613 SMN2-210ENST00000511812 867 ntTSL 2 BASIC19.42■□□□□ 0.7
CDK7P50613 AP000344.2-201ENST00000512987 629 ntBASIC19.42■□□□□ 0.7
CDK7P50613 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
CDK7P50613 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC19.42■□□□□ 0.7
CDK7P50613 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC19.42■□□□□ 0.7
CDK7P50613 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CDK7P50613 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CDK7P50613 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 BCAR1-209ENST00000546196 1340 ntBASIC19.42■□□□□ 0.7
CDK7P50613 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CDK7P50613 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CDK7P50613 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CDK7P50613 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK7P50613 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
CDK7P50613 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDK7P50613 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
CDK7P50613 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CDK7P50613 STOM-202ENST00000347359 870 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK7P50613 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 AL035633.1-201ENST00000406139 838 ntBASIC19.41■□□□□ 0.7
CDK7P50613 TSEN15P1-201ENST00000423257 515 ntBASIC19.41■□□□□ 0.7
CDK7P50613 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK7P50613 AC074386.1-202ENST00000463561 864 ntBASIC19.41■□□□□ 0.7
CDK7P50613 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 AC011467.4-201ENST00000594891 528 ntBASIC19.41■□□□□ 0.7
CDK7P50613 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDK7P50613 AC093028.1-201ENST00000622998 982 ntBASIC19.41■□□□□ 0.7
CDK7P50613 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK7P50613 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CDK7P50613 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK7P50613 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.41■□□□□ 0.7
CDK7P50613 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CDK7P50613 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
CDK7P50613 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
CDK7P50613 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.4■□□□□ 0.7
CDK7P50613 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC19.4■□□□□ 0.7
CDK7P50613 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CDK7P50613 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.4■□□□□ 0.7
CDK7P50613 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK7P50613 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CDK7P50613 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 PODN-203ENST00000395871 2744 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK7P50613 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.4■□□□□ 0.7
CDK7P50613 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 AC025580.3-201ENST00000617932 1424 ntBASIC19.4■□□□□ 0.7
CDK7P50613 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CDK7P50613 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.39■□□□□ 0.7
CDK7P50613 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CDK7P50613 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK7P50613 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK7P50613 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK7P50613 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK7P50613 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK7P50613 AP002414.1-201ENST00000391405 1147 ntBASIC19.39■□□□□ 0.69
CDK7P50613 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CDK7P50613 FAM58CP-201ENST00000435741 640 ntBASIC19.39■□□□□ 0.69
CDK7P50613 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CDK7P50613 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.39■□□□□ 0.69
CDK7P50613 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms