Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 GID4-202ENST00000376345 1391 ntTSL 3 BASIC19.73■□□□□ 0.75
CENPFP49454 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CENPFP49454 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CENPFP49454 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
CENPFP49454 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 HILS1-202ENST00000545329 423 ntBASIC19.73■□□□□ 0.75
CENPFP49454 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CENPFP49454 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CENPFP49454 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.72■□□□□ 0.75
CENPFP49454 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.72■□□□□ 0.75
CENPFP49454 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC19.72■□□□□ 0.75
CENPFP49454 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CENPFP49454 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
CENPFP49454 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 AC010336.2-201ENST00000564226 506 ntBASIC19.72■□□□□ 0.75
CENPFP49454 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.72■□□□□ 0.75
CENPFP49454 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
CENPFP49454 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
CENPFP49454 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.72■□□□□ 0.75
CENPFP49454 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CENPFP49454 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC19.72■□□□□ 0.75
CENPFP49454 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CENPFP49454 COX11-202ENST00000571584 1108 ntTSL 2 BASIC19.72■□□□□ 0.75
CENPFP49454 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CENPFP49454 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
CENPFP49454 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
CENPFP49454 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.72■□□□□ 0.75
CENPFP49454 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CENPFP49454 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CENPFP49454 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPFP49454 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPFP49454 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
CENPFP49454 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPFP49454 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.71■□□□□ 0.75
CENPFP49454 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.71■□□□□ 0.75
CENPFP49454 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CENPFP49454 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CENPFP49454 U91328.1-201ENST00000437528 223 ntBASIC19.71■□□□□ 0.75
CENPFP49454 AL390754.1-201ENST00000619088 582 ntBASIC19.71■□□□□ 0.75
CENPFP49454 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.71■□□□□ 0.75
CENPFP49454 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPFP49454 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC19.71■□□□□ 0.75
CENPFP49454 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.71■□□□□ 0.75
CENPFP49454 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.71■□□□□ 0.75
CENPFP49454 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CENPFP49454 COX5BP8-201ENST00000416911 349 ntBASIC19.7■□□□□ 0.74
CENPFP49454 TREML5P-201ENST00000421694 576 ntBASIC19.7■□□□□ 0.74
CENPFP49454 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.7■□□□□ 0.74
CENPFP49454 AC097493.3-201ENST00000509725 367 ntBASIC19.7■□□□□ 0.74
CENPFP49454 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC19.7■□□□□ 0.74
CENPFP49454 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.7■□□□□ 0.74
CENPFP49454 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.7■□□□□ 0.74
CENPFP49454 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CENPFP49454 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.7■□□□□ 0.74
CENPFP49454 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CENPFP49454 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 AC006116.8-202ENST00000587620 1550 ntBASIC19.7■□□□□ 0.74
CENPFP49454 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.7■□□□□ 0.74
CENPFP49454 RN7SL692P-201ENST00000464677 288 ntBASIC19.7■□□□□ 0.74
CENPFP49454 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CENPFP49454 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.7■□□□□ 0.74
CENPFP49454 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CENPFP49454 DDT-204ENST00000404092 805 ntTSL 3 BASIC19.7■□□□□ 0.74
CENPFP49454 AL355306.1-201ENST00000415580 579 ntBASIC19.7■□□□□ 0.74
CENPFP49454 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.7■□□□□ 0.74
CENPFP49454 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC19.7■□□□□ 0.74
CENPFP49454 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.7■□□□□ 0.74
CENPFP49454 MIR6799-201ENST00000620297 69 ntBASIC19.7■□□□□ 0.74
CENPFP49454 AL033527.4-201ENST00000641026 673 ntBASIC19.7■□□□□ 0.74
CENPFP49454 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CENPFP49454 AL096828.2-201ENST00000567259 1965 ntBASIC19.7■□□□□ 0.74
CENPFP49454 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CENPFP49454 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms