Protein–RNA interactions for Protein: P43004

SLC1A2, Excitatory amino acid transporter 2, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A2P43004 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A2P43004 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A2P43004 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A2P43004 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A2P43004 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A2P43004 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.58■□□□□ 0.41
SLC1A2P43004 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A2P43004 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A2P43004 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SLC1A2P43004 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC1A2P43004 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC1A2P43004 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 RN7SL606P-201ENST00000472779 293 ntBASIC17.58■□□□□ 0.4
SLC1A2P43004 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.58■□□□□ 0.4
SLC1A2P43004 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.58■□□□□ 0.4
SLC1A2P43004 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
SLC1A2P43004 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A2P43004 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC1A2P43004 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC1A2P43004 PRORSD1P-202ENST00000563365 2154 ntBASIC17.57■□□□□ 0.4
SLC1A2P43004 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A2P43004 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A2P43004 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC1A2P43004 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC1A2P43004 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 AC097374.2-201ENST00000618617 1306 ntBASIC17.57■□□□□ 0.4
SLC1A2P43004 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A2P43004 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A2P43004 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC1A2P43004 AL845331.1-201ENST00000424978 1190 ntBASIC17.57■□□□□ 0.4
SLC1A2P43004 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC1A2P43004 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SLC1A2P43004 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A2P43004 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.57■□□□□ 0.4
SLC1A2P43004 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC1A2P43004 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC1A2P43004 AC124864.1-201ENST00000623408 392 ntBASIC17.57■□□□□ 0.4
SLC1A2P43004 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC1A2P43004 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC1A2P43004 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC1A2P43004 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A2P43004 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC1A2P43004 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC1A2P43004 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC1A2P43004 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC1A2P43004 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
SLC1A2P43004 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC1A2P43004 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC1A2P43004 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC1A2P43004 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 AC022211.2-201ENST00000585075 2527 ntBASIC17.56■□□□□ 0.4
SLC1A2P43004 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC1A2P43004 AC009053.2-201ENST00000563701 2365 ntBASIC17.56■□□□□ 0.4
SLC1A2P43004 AL031133.1-201ENST00000406807 723 ntBASIC17.56■□□□□ 0.4
SLC1A2P43004 AC007967.3-201ENST00000434308 558 ntBASIC17.56■□□□□ 0.4
SLC1A2P43004 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC1A2P43004 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC1A2P43004 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC1A2P43004 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC1A2P43004 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC1A2P43004 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SLC1A2P43004 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC1A2P43004 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC1A2P43004 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms