Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
USP8P40818 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP8P40818 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP8P40818 AC006116.8-202ENST00000587620 1550 ntBASIC19.27■□□□□ 0.67
USP8P40818 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP8P40818 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
USP8P40818 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.27■□□□□ 0.67
USP8P40818 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.26■□□□□ 0.67
USP8P40818 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC19.26■□□□□ 0.67
USP8P40818 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.26■□□□□ 0.67
USP8P40818 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC19.26■□□□□ 0.67
USP8P40818 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 TSPY12P-201ENST00000421279 868 ntBASIC19.26■□□□□ 0.67
USP8P40818 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.26■□□□□ 0.67
USP8P40818 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.26■□□□□ 0.67
USP8P40818 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.26■□□□□ 0.67
USP8P40818 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.26■□□□□ 0.67
USP8P40818 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
USP8P40818 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
USP8P40818 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 EML3-212ENST00000494176 2901 ntTSL 2 BASIC19.26■□□□□ 0.67
USP8P40818 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.26■□□□□ 0.67
USP8P40818 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC19.26■□□□□ 0.67
USP8P40818 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
USP8P40818 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
USP8P40818 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.25■□□□□ 0.67
USP8P40818 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC19.25■□□□□ 0.67
USP8P40818 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP8P40818 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.25■□□□□ 0.67
USP8P40818 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.25■□□□□ 0.67
USP8P40818 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
USP8P40818 HYMAI.1-201ENST00000620949 238 ntBASIC19.25■□□□□ 0.67
USP8P40818 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC19.25■□□□□ 0.67
USP8P40818 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.25■□□□□ 0.67
USP8P40818 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC19.25■□□□□ 0.67
USP8P40818 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
USP8P40818 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
USP8P40818 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
USP8P40818 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.24■□□□□ 0.67
USP8P40818 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
USP8P40818 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
USP8P40818 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP8P40818 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
USP8P40818 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP8P40818 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.24■□□□□ 0.67
USP8P40818 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP8P40818 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
USP8P40818 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC19.24■□□□□ 0.67
USP8P40818 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
USP8P40818 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 MIR662-201ENST00000384847 95 ntBASIC19.24■□□□□ 0.67
USP8P40818 IGHGP-201ENST00000390555 1178 ntBASIC19.24■□□□□ 0.67
USP8P40818 KRT18P65-201ENST00000439811 1286 ntBASIC19.24■□□□□ 0.67
USP8P40818 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.24■□□□□ 0.67
USP8P40818 LINC01238-205ENST00000567549 1107 ntBASIC19.24■□□□□ 0.67
USP8P40818 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC19.24■□□□□ 0.67
USP8P40818 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.24■□□□□ 0.67
USP8P40818 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
USP8P40818 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC19.24■□□□□ 0.67
USP8P40818 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
USP8P40818 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
USP8P40818 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
USP8P40818 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms