Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC22.02■■□□□ 1.12
RFC4P35249 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC22.02■■□□□ 1.12
RFC4P35249 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC22.02■■□□□ 1.12
RFC4P35249 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC22.02■■□□□ 1.12
RFC4P35249 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RFC4P35249 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
RFC4P35249 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC22.02■■□□□ 1.12
RFC4P35249 AL590787.1-201ENST00000568856 1315 ntBASIC22.02■■□□□ 1.12
RFC4P35249 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC22.02■■□□□ 1.11
RFC4P35249 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22.02■■□□□ 1.11
RFC4P35249 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.02■■□□□ 1.11
RFC4P35249 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
RFC4P35249 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC22.01■■□□□ 1.11
RFC4P35249 TIMM8BP1-201ENST00000452384 211 ntBASIC22.01■■□□□ 1.11
RFC4P35249 SLBP-205ENST00000488267 987 ntTSL 2 BASIC22.01■■□□□ 1.11
RFC4P35249 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RFC4P35249 GATB-205ENST00000508611 605 ntTSL 2 BASIC22.01■■□□□ 1.11
RFC4P35249 RNA5SP421-201ENST00000516864 134 ntBASIC22.01■■□□□ 1.11
RFC4P35249 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
RFC4P35249 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
RFC4P35249 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC22.01■■□□□ 1.11
RFC4P35249 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC22.01■■□□□ 1.11
RFC4P35249 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFC4P35249 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC22■■□□□ 1.11
RFC4P35249 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
RFC4P35249 AC002558.1-201ENST00000488906 803 ntBASIC22■■□□□ 1.11
RFC4P35249 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC22■■□□□ 1.11
RFC4P35249 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22■■□□□ 1.11
RFC4P35249 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22■■□□□ 1.11
RFC4P35249 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFC4P35249 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RFC4P35249 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
RFC4P35249 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC21.99■■□□□ 1.11
RFC4P35249 MYCLP1-201ENST00000372451 1075 ntBASIC21.99■■□□□ 1.11
RFC4P35249 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC21.99■■□□□ 1.11
RFC4P35249 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC21.99■■□□□ 1.11
RFC4P35249 AL627223.1-201ENST00000416693 442 ntBASIC21.99■■□□□ 1.11
RFC4P35249 ACTG1P4-201ENST00000425123 1122 ntBASIC21.99■■□□□ 1.11
RFC4P35249 ADH5P3-201ENST00000433842 1137 ntBASIC21.99■■□□□ 1.11
RFC4P35249 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC21.99■■□□□ 1.11
RFC4P35249 NMU-203ENST00000507338 658 ntTSL 3 BASIC21.99■■□□□ 1.11
RFC4P35249 AC190387.1-201ENST00000551683 408 ntBASIC21.99■■□□□ 1.11
RFC4P35249 DUX4L27-201ENST00000554796 1261 ntBASIC21.99■■□□□ 1.11
RFC4P35249 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC21.99■■□□□ 1.11
RFC4P35249 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC21.99■■□□□ 1.11
RFC4P35249 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC21.99■■□□□ 1.11
RFC4P35249 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC21.99■■□□□ 1.11
RFC4P35249 AL390955.2-201ENST00000603032 514 ntBASIC21.99■■□□□ 1.11
RFC4P35249 AJ011932.1-201ENST00000621707 465 ntBASIC21.99■■□□□ 1.11
RFC4P35249 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFC4P35249 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC21.99■■□□□ 1.11
RFC4P35249 SLC25A24-204ENST00000569674 2357 ntBASIC21.98■■□□□ 1.11
RFC4P35249 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.98■■□□□ 1.11
RFC4P35249 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
RFC4P35249 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC21.98■■□□□ 1.11
RFC4P35249 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC21.98■■□□□ 1.11
RFC4P35249 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.98■■□□□ 1.11
RFC4P35249 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
RFC4P35249 AC067863.1-201ENST00000494933 530 ntBASIC21.98■■□□□ 1.11
RFC4P35249 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms