Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.78■□□□□ 0.76
GGPS1O95749 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.78■□□□□ 0.76
GGPS1O95749 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.78■□□□□ 0.76
GGPS1O95749 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
GGPS1O95749 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
GGPS1O95749 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.78■□□□□ 0.76
GGPS1O95749 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC19.77■□□□□ 0.76
GGPS1O95749 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.77■□□□□ 0.76
GGPS1O95749 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GGPS1O95749 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC19.77■□□□□ 0.76
GGPS1O95749 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC19.77■□□□□ 0.76
GGPS1O95749 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC19.77■□□□□ 0.76
GGPS1O95749 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.77■□□□□ 0.76
GGPS1O95749 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GGPS1O95749 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 MIR1199-201ENST00000621445 119 ntBASIC19.77■□□□□ 0.76
GGPS1O95749 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
GGPS1O95749 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
GGPS1O95749 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.75
GGPS1O95749 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
GGPS1O95749 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.77■□□□□ 0.75
GGPS1O95749 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
GGPS1O95749 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.76■□□□□ 0.75
GGPS1O95749 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
GGPS1O95749 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.76■□□□□ 0.75
GGPS1O95749 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.76■□□□□ 0.75
GGPS1O95749 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.76■□□□□ 0.75
GGPS1O95749 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 AC003669.1-201ENST00000334569 611 ntBASIC19.76■□□□□ 0.75
GGPS1O95749 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 AC073621.1-201ENST00000392730 636 ntBASIC19.76■□□□□ 0.75
GGPS1O95749 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC19.76■□□□□ 0.75
GGPS1O95749 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.76■□□□□ 0.75
GGPS1O95749 PGAM5P1-201ENST00000518923 814 ntBASIC19.76■□□□□ 0.75
GGPS1O95749 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.76■□□□□ 0.75
GGPS1O95749 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GGPS1O95749 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.76■□□□□ 0.75
GGPS1O95749 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC19.76■□□□□ 0.75
GGPS1O95749 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
GGPS1O95749 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 FAM197Y3-203ENST00000618346 717 ntBASIC19.76■□□□□ 0.75
GGPS1O95749 AL589182.2-201ENST00000619332 1049 ntBASIC19.76■□□□□ 0.75
GGPS1O95749 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.76■□□□□ 0.75
GGPS1O95749 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.76■□□□□ 0.75
GGPS1O95749 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.76■□□□□ 0.75
GGPS1O95749 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.76■□□□□ 0.75
GGPS1O95749 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
GGPS1O95749 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
GGPS1O95749 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
GGPS1O95749 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.75■□□□□ 0.75
GGPS1O95749 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.75■□□□□ 0.75
GGPS1O95749 NOC2LP2-201ENST00000407594 1944 ntBASIC19.75■□□□□ 0.75
GGPS1O95749 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
GGPS1O95749 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.75■□□□□ 0.75
GGPS1O95749 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
GGPS1O95749 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.75■□□□□ 0.75
GGPS1O95749 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC19.75■□□□□ 0.75
GGPS1O95749 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC19.75■□□□□ 0.75
GGPS1O95749 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.75■□□□□ 0.75
GGPS1O95749 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
GGPS1O95749 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms