Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CNOT4O95628 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.7■□□□□ 0.1
CNOT4O95628 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.7■□□□□ 0.1
CNOT4O95628 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CNOT4O95628 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CNOT4O95628 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.7■□□□□ 0.1
CNOT4O95628 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.7■□□□□ 0.1
CNOT4O95628 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CNOT4O95628 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC15.7■□□□□ 0.1
CNOT4O95628 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
CNOT4O95628 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 FAM220CP-201ENST00000395253 831 ntBASIC15.7■□□□□ 0.1
CNOT4O95628 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.7■□□□□ 0.1
CNOT4O95628 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.7■□□□□ 0.1
CNOT4O95628 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC15.7■□□□□ 0.1
CNOT4O95628 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.7■□□□□ 0.1
CNOT4O95628 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 COX5A-202ENST00000562233 441 ntTSL 3 BASIC15.7■□□□□ 0.1
CNOT4O95628 MIR5100-201ENST00000579544 119 ntBASIC15.7■□□□□ 0.1
CNOT4O95628 AL591684.3-201ENST00000605187 298 ntBASIC15.7■□□□□ 0.1
CNOT4O95628 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.7■□□□□ 0.1
CNOT4O95628 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
CNOT4O95628 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.7■□□□□ 0.1
CNOT4O95628 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CNOT4O95628 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNOT4O95628 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.69■□□□□ 0.1
CNOT4O95628 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 INTS4P1-201ENST00000438455 1935 ntBASIC15.69■□□□□ 0.1
CNOT4O95628 NUS1P2-201ENST00000417358 873 ntBASIC15.69■□□□□ 0.1
CNOT4O95628 THAP5-204ENST00000438865 868 ntTSL 2 BASIC15.69■□□□□ 0.1
CNOT4O95628 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.69■□□□□ 0.1
CNOT4O95628 AC122714.2-201ENST00000502787 707 ntBASIC15.69■□□□□ 0.1
CNOT4O95628 AL662844.1-201ENST00000546340 181 ntBASIC15.69■□□□□ 0.1
CNOT4O95628 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.69■□□□□ 0.1
CNOT4O95628 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC15.69■□□□□ 0.1
CNOT4O95628 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.69■□□□□ 0.1
CNOT4O95628 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNOT4O95628 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNOT4O95628 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CNOT4O95628 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT4O95628 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC15.69■□□□□ 0.1
CNOT4O95628 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC15.69■□□□□ 0.1
CNOT4O95628 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
CNOT4O95628 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT4O95628 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT4O95628 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 BICD1-207ENST00000551848 1962 ntBASIC15.68■□□□□ 0.1
CNOT4O95628 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT4O95628 KRT8P47-201ENST00000604727 1398 ntBASIC15.68■□□□□ 0.1
CNOT4O95628 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT4O95628 EMD-201ENST00000369835 966 ntTSL 3 BASIC15.68■□□□□ 0.1
CNOT4O95628 DDX43P3-201ENST00000441064 443 ntBASIC15.68■□□□□ 0.1
CNOT4O95628 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC15.68■□□□□ 0.1
CNOT4O95628 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT4O95628 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.68■□□□□ 0.1
CNOT4O95628 GZMM-202ENST00000592501 941 ntTSL 3 BASIC15.68■□□□□ 0.1
CNOT4O95628 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT4O95628 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms