Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
GFRA3O60609 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
GFRA3O60609 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.98■□□□□ 0.31
GFRA3O60609 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.98■□□□□ 0.31
GFRA3O60609 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC16.98■□□□□ 0.31
GFRA3O60609 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.98■□□□□ 0.31
GFRA3O60609 AP005482.1-201ENST00000563722 1273 ntBASIC16.98■□□□□ 0.31
GFRA3O60609 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.98■□□□□ 0.31
GFRA3O60609 RN7SL219P-201ENST00000582872 296 ntBASIC16.98■□□□□ 0.31
GFRA3O60609 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.98■□□□□ 0.31
GFRA3O60609 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.98■□□□□ 0.31
GFRA3O60609 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
GFRA3O60609 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.98■□□□□ 0.31
GFRA3O60609 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.98■□□□□ 0.31
GFRA3O60609 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
GFRA3O60609 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.97■□□□□ 0.31
GFRA3O60609 AC129492.6-201ENST00000611383 1305 ntBASIC16.97■□□□□ 0.31
GFRA3O60609 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GFRA3O60609 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
GFRA3O60609 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
GFRA3O60609 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.97■□□□□ 0.31
GFRA3O60609 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.97■□□□□ 0.31
GFRA3O60609 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
GFRA3O60609 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.97■□□□□ 0.31
GFRA3O60609 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.97■□□□□ 0.31
GFRA3O60609 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.97■□□□□ 0.31
GFRA3O60609 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.97■□□□□ 0.31
GFRA3O60609 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
GFRA3O60609 RN7SL190P-201ENST00000582519 257 ntBASIC16.97■□□□□ 0.31
GFRA3O60609 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
GFRA3O60609 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.97■□□□□ 0.31
GFRA3O60609 AC133552.6-201ENST00000613406 534 ntBASIC16.97■□□□□ 0.31
GFRA3O60609 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC16.97■□□□□ 0.31
GFRA3O60609 AL161645.1-201ENST00000622716 1255 ntBASIC16.97■□□□□ 0.31
GFRA3O60609 COX11-210ENST00000639671 696 ntBASIC16.97■□□□□ 0.31
GFRA3O60609 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC16.97■□□□□ 0.31
GFRA3O60609 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.97■□□□□ 0.31
GFRA3O60609 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.97■□□□□ 0.31
GFRA3O60609 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.97■□□□□ 0.31
GFRA3O60609 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.97■□□□□ 0.31
GFRA3O60609 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.97■□□□□ 0.31
GFRA3O60609 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
GFRA3O60609 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.97■□□□□ 0.31
GFRA3O60609 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.96■□□□□ 0.31
GFRA3O60609 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.96■□□□□ 0.31
GFRA3O60609 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC16.96■□□□□ 0.31
GFRA3O60609 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 AC092473.1-201ENST00000441098 221 ntBASIC16.96■□□□□ 0.31
GFRA3O60609 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.96■□□□□ 0.31
GFRA3O60609 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC16.96■□□□□ 0.31
GFRA3O60609 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.96■□□□□ 0.31
GFRA3O60609 AL512343.1-201ENST00000605837 169 ntBASIC16.96■□□□□ 0.31
GFRA3O60609 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.96■□□□□ 0.31
GFRA3O60609 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
GFRA3O60609 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
GFRA3O60609 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
GFRA3O60609 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
GFRA3O60609 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
GFRA3O60609 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.96■□□□□ 0.3
GFRA3O60609 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.96■□□□□ 0.3
GFRA3O60609 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
GFRA3O60609 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.3
GFRA3O60609 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA3O60609 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
GFRA3O60609 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC16.95■□□□□ 0.3
GFRA3O60609 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms