Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM38O00635 RNA5SP419-201ENST00000515908 135 ntBASIC17.78■□□□□ 0.44
TRIM38O00635 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.78■□□□□ 0.44
TRIM38O00635 AL671883.3-201ENST00000603274 991 ntBASIC17.78■□□□□ 0.44
TRIM38O00635 AL591684.3-201ENST00000605187 298 ntBASIC17.78■□□□□ 0.44
TRIM38O00635 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM38O00635 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM38O00635 AC099343.3-201ENST00000605834 2503 ntBASIC17.78■□□□□ 0.44
TRIM38O00635 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM38O00635 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM38O00635 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM38O00635 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM38O00635 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM38O00635 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM38O00635 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM38O00635 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM38O00635 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM38O00635 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM38O00635 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM38O00635 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM38O00635 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
TRIM38O00635 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM38O00635 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM38O00635 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM38O00635 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM38O00635 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM38O00635 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM38O00635 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 AC112777.1-201ENST00000540175 1423 ntBASIC17.77■□□□□ 0.44
TRIM38O00635 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM38O00635 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM38O00635 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM38O00635 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TRIM38O00635 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM38O00635 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM38O00635 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
TRIM38O00635 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM38O00635 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM38O00635 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM38O00635 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRIM38O00635 FAM197Y8-203ENST00000450145 560 ntBASIC17.76■□□□□ 0.43
TRIM38O00635 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM38O00635 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 AC096582.2-201ENST00000510860 516 ntBASIC17.76■□□□□ 0.43
TRIM38O00635 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM38O00635 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TRIM38O00635 AC064862.7-201ENST00000604520 867 ntBASIC17.76■□□□□ 0.43
TRIM38O00635 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM38O00635 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
TRIM38O00635 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM38O00635 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM38O00635 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
TRIM38O00635 AL645608.8-201ENST00000606034 2086 ntBASIC17.75■□□□□ 0.43
TRIM38O00635 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
TRIM38O00635 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM38O00635 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM38O00635 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TRIM38O00635 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM38O00635 AP001005.1-201ENST00000571755 1248 ntBASIC17.75■□□□□ 0.43
TRIM38O00635 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.75■□□□□ 0.43
TRIM38O00635 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.75■□□□□ 0.43
TRIM38O00635 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM38O00635 AF228730.7-201ENST00000641842 219 ntBASIC17.75■□□□□ 0.43
TRIM38O00635 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM38O00635 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.75■□□□□ 0.43
TRIM38O00635 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM38O00635 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
TRIM38O00635 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.75■□□□□ 0.43
TRIM38O00635 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms