Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
O00370 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC18.83■□□□□ 0.6
O00370 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.83■□□□□ 0.6
O00370 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.82■□□□□ 0.6
O00370 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.82■□□□□ 0.6
O00370 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
O00370 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
O00370 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.82■□□□□ 0.6
O00370 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.82■□□□□ 0.6
O00370 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
O00370 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
O00370 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.82■□□□□ 0.6
O00370 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.82■□□□□ 0.6
O00370 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.82■□□□□ 0.6
O00370 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.82■□□□□ 0.6
O00370 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.82■□□□□ 0.6
O00370 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 AC099398.1-201ENST00000567919 2776 ntBASIC18.82■□□□□ 0.6
O00370 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.82■□□□□ 0.6
O00370 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
O00370 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
O00370 HCG11-201ENST00000411553 5696 ntBASIC18.82■□□□□ 0.6
O00370 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.82■□□□□ 0.6
O00370 ADM-208ENST00000534464 1640 ntTSL 2 BASIC18.82■□□□□ 0.6
O00370 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
O00370 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
O00370 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.81■□□□□ 0.6
O00370 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.81■□□□□ 0.6
O00370 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
O00370 BX276092.7-203ENST00000637198 1536 ntBASIC18.81■□□□□ 0.6
O00370 AL355312.1-201ENST00000407115 2176 ntBASIC18.81■□□□□ 0.6
O00370 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.81■□□□□ 0.6
O00370 REXO1L11P-201ENST00000620964 1927 ntBASIC18.81■□□□□ 0.6
O00370 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
O00370 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
O00370 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
O00370 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
O00370 COX5BP2-201ENST00000392354 334 ntBASIC18.81■□□□□ 0.6
O00370 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.81■□□□□ 0.6
O00370 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
O00370 MINOS1P3-201ENST00000457048 203 ntBASIC18.81■□□□□ 0.6
O00370 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.81■□□□□ 0.6
O00370 AC009533.2-201ENST00000543664 586 ntBASIC18.81■□□□□ 0.6
O00370 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
O00370 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.81■□□□□ 0.6
O00370 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
O00370 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.81■□□□□ 0.6
O00370 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
O00370 AL645608.8-201ENST00000606034 2086 ntBASIC18.81■□□□□ 0.6
O00370 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.81■□□□□ 0.6
O00370 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
O00370 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
O00370 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.8■□□□□ 0.6
O00370 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.8■□□□□ 0.6
O00370 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 TP73-AS1-210ENST00000637775 1455 ntBASIC18.8■□□□□ 0.6
O00370 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
O00370 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.8■□□□□ 0.6
O00370 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC18.8■□□□□ 0.6
O00370 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.8■□□□□ 0.6
O00370 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.8■□□□□ 0.6
O00370 AC011467.2-201ENST00000598425 242 ntBASIC18.8■□□□□ 0.6
O00370 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC18.8■□□□□ 0.6
O00370 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
O00370 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.79■□□□□ 0.6
O00370 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.79■□□□□ 0.6
O00370 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.79■□□□□ 0.6
O00370 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.79■□□□□ 0.6
O00370 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
O00370 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.79■□□□□ 0.6
O00370 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
O00370 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms