Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 Z83836.1-201ENST00000624605 1642 ntBASIC16.74■□□□□ 0.27
UPK1AO00322 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
UPK1AO00322 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
UPK1AO00322 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.74■□□□□ 0.27
UPK1AO00322 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
UPK1AO00322 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
UPK1AO00322 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.74■□□□□ 0.27
UPK1AO00322 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
UPK1AO00322 AL139384.1-201ENST00000612143 3047 ntBASIC16.74■□□□□ 0.27
UPK1AO00322 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.74■□□□□ 0.27
UPK1AO00322 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPK1AO00322 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.73■□□□□ 0.27
UPK1AO00322 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 PCDHB19P-201ENST00000570871 2371 ntBASIC16.73■□□□□ 0.27
UPK1AO00322 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.73■□□□□ 0.27
UPK1AO00322 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
UPK1AO00322 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
UPK1AO00322 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 AL645929.1-201ENST00000420084 975 ntBASIC16.73■□□□□ 0.27
UPK1AO00322 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.73■□□□□ 0.27
UPK1AO00322 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.73■□□□□ 0.27
UPK1AO00322 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
UPK1AO00322 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.73■□□□□ 0.27
UPK1AO00322 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
UPK1AO00322 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.72■□□□□ 0.27
UPK1AO00322 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
UPK1AO00322 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK1AO00322 AC105020.1-201ENST00000435356 2205 ntBASIC16.72■□□□□ 0.27
UPK1AO00322 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
UPK1AO00322 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK1AO00322 AL031133.1-201ENST00000406807 723 ntBASIC16.72■□□□□ 0.27
UPK1AO00322 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
UPK1AO00322 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK1AO00322 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.72■□□□□ 0.27
UPK1AO00322 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.72■□□□□ 0.27
UPK1AO00322 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.72■□□□□ 0.27
UPK1AO00322 AL136038.3-201ENST00000561909 1096 ntBASIC16.72■□□□□ 0.27
UPK1AO00322 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.72■□□□□ 0.27
UPK1AO00322 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 KRT8P47-201ENST00000604727 1398 ntBASIC16.72■□□□□ 0.27
UPK1AO00322 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.72■□□□□ 0.27
UPK1AO00322 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
UPK1AO00322 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms