Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC19.86■□□□□ 0.77
DDX39AO00148 AC109462.3-201ENST00000573934 613 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 AD001527.2-201ENST00000622994 785 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 AC073592.5-201ENST00000624854 528 ntBASIC19.86■□□□□ 0.77
DDX39AO00148 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
DDX39AO00148 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.86■□□□□ 0.77
DDX39AO00148 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.86■□□□□ 0.77
DDX39AO00148 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
DDX39AO00148 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
DDX39AO00148 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX39AO00148 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
DDX39AO00148 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX39AO00148 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC19.85■□□□□ 0.77
DDX39AO00148 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.85■□□□□ 0.77
DDX39AO00148 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX39AO00148 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC19.85■□□□□ 0.77
DDX39AO00148 AC103564.2-201ENST00000432853 1299 ntBASIC19.85■□□□□ 0.77
DDX39AO00148 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX39AO00148 AL049840.3-201ENST00000602669 611 ntBASIC19.85■□□□□ 0.77
DDX39AO00148 AL773604.1-201ENST00000617417 272 ntBASIC19.85■□□□□ 0.77
DDX39AO00148 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.85■□□□□ 0.77
DDX39AO00148 PMPCAP1-201ENST00000508114 1576 ntBASIC19.85■□□□□ 0.77
DDX39AO00148 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX39AO00148 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC19.85■□□□□ 0.77
DDX39AO00148 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
DDX39AO00148 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX39AO00148 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
DDX39AO00148 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.84■□□□□ 0.77
DDX39AO00148 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
DDX39AO00148 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
DDX39AO00148 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 AL031284.1-201ENST00000419297 478 ntBASIC19.84■□□□□ 0.77
DDX39AO00148 HNRNPDP1-201ENST00000439535 754 ntBASIC19.84■□□□□ 0.77
DDX39AO00148 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX39AO00148 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX39AO00148 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
DDX39AO00148 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 AC019129.2-201ENST00000609837 1235 ntBASIC19.84■□□□□ 0.77
DDX39AO00148 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.84■□□□□ 0.77
DDX39AO00148 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
DDX39AO00148 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.84■□□□□ 0.77
DDX39AO00148 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.84■□□□□ 0.77
DDX39AO00148 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
DDX39AO00148 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX39AO00148 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDX39AO00148 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
DDX39AO00148 AL049757.1-201ENST00000616842 1596 ntBASIC19.83■□□□□ 0.77
DDX39AO00148 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX39AO00148 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX39AO00148 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX39AO00148 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
DDX39AO00148 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.83■□□□□ 0.77
DDX39AO00148 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
DDX39AO00148 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC19.83■□□□□ 0.77
DDX39AO00148 RPS2P1-201ENST00000434010 821 ntBASIC19.83■□□□□ 0.77
DDX39AO00148 AC018712.1-201ENST00000455767 687 ntBASIC19.83■□□□□ 0.77
DDX39AO00148 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
DDX39AO00148 PENK-208ENST00000523051 772 ntTSL 5 BASIC19.83■□□□□ 0.77
DDX39AO00148 AP001005.1-201ENST00000571755 1248 ntBASIC19.83■□□□□ 0.77
DDX39AO00148 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC19.83■□□□□ 0.77
DDX39AO00148 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.83■□□□□ 0.77
DDX39AO00148 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.83■□□□□ 0.76
DDX39AO00148 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX39AO00148 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.83■□□□□ 0.76
DDX39AO00148 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
DDX39AO00148 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.83■□□□□ 0.76
DDX39AO00148 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX39AO00148 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
DDX39AO00148 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX39AO00148 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.82■□□□□ 0.76
DDX39AO00148 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
DDX39AO00148 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms