Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TNFSF12-TNFSF13A0A0A6YY99 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC007967.3-201ENST00000434308 558 ntBASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 KRT18P31-201ENST00000506277 1292 ntBASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC091304.2-201ENST00000564639 760 ntBASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 IFNL4P1-201ENST00000607083 540 ntBASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 OR6D1P-202ENST00000641007 5290 ntBASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC16.08■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC099336.1-202ENST00000602961 463 ntBASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC138894.3-201ENST00000603787 634 ntBASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 LINC01451-201ENST00000623792 534 ntBASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 NSUN5P1-202ENST00000421140 1535 ntBASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 NSUN5P2-203ENST00000457352 1529 ntBASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 AC004870.1-201ENST00000315132 882 ntBASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TNFSF12-TNFSF13A0A0A6YY99 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms