Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 AL355312.1-201ENST00000407115 2176 ntBASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV30A0A087WSZ9 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 OVCH1-AS1-204ENST00000641955 5529 ntBASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 DDT-203ENST00000403754 569 ntTSL 3 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 DDT-206ENST00000430101 573 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 COX11P1-201ENST00000489116 835 ntBASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 AL136038.4-201ENST00000603606 1261 ntBASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 AC100803.2-201ENST00000562459 1963 ntBASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.91□□□□□ -0.18
TRAV30A0A087WSZ9 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 FER1L4-210ENST00000615531 5998 ntBASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 SLC25A3P1-201ENST00000443844 931 ntBASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 AC009154.2-201ENST00000621177 724 ntBASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TRAV30A0A087WSZ9 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
TRAV30A0A087WSZ9 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC13.9□□□□□ -0.19
TRAV30A0A087WSZ9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.9□□□□□ -0.19
TRAV30A0A087WSZ9 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC13.9□□□□□ -0.19
TRAV30A0A087WSZ9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms