Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 HMGA1P5-201ENST00000412453 271 ntBASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 ECEL1P3-201ENST00000427961 737 ntBASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 LINC01311-201ENST00000565162 1445 ntBASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CAPN6Q9Y6Q1 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 BX276092.7-203ENST00000637198 1536 ntBASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 OS9-205ENST00000413095 1660 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 NAPSB-206ENST00000562112 1266 ntBASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.7■□□□□ 0.58
CAPN6Q9Y6Q1 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 SLC25A1P3-201ENST00000395415 828 ntBASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 GCSHP2-201ENST00000560971 527 ntBASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 AL512604.3-201ENST00000569583 964 ntBASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 AC004263.2-201ENST00000617183 678 ntBASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 AC079602.3-201ENST00000623931 403 ntBASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.69■□□□□ 0.58
CAPN6Q9Y6Q1 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms