Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AC133963.1-201ENST00000504166 1679 ntBASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 SPDYE13P-201ENST00000445314 798 ntBASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 MTCL1P1-201ENST00000446207 792 ntBASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 AC068472.1-201ENST00000474589 881 ntBASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDHGA11Q9Y5H2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 PKD1P1-201ENST00000458669 6805 ntBASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 RNF126P1-202ENST00000569893 925 ntBASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 LINC01451-201ENST00000623792 534 ntBASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
PCDHGA11Q9Y5H2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PCDHGA11Q9Y5H2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 AL645929.1-201ENST00000420084 975 ntBASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDHGA11Q9Y5H2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms