Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 RPS2P55-201ENST00000397318 883 ntBASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 AC107956.1-201ENST00000494359 873 ntBASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 AC096733.2-201ENST00000609937 1394 ntBASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PCDHGB1Q9Y5G3 AC036111.1-201ENST00000533973 1582 ntBASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 HOXB1-202ENST00000577092 1414 ntBASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 LINC01451-201ENST00000623792 534 ntBASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 AL513477.1-201ENST00000602865 2407 ntBASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.21■□□□□ 0.19
PCDHGB1Q9Y5G3 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PCDHGB1Q9Y5G3 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
PCDHGB1Q9Y5G3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PCDHGB1Q9Y5G3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 AC060834.1-201ENST00000443027 2032 ntBASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 RARRES2P10-201ENST00000564312 460 ntBASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 AF186192.3-201ENST00000583427 947 ntBASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.2■□□□□ 0.18
PCDHGB1Q9Y5G3 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms