Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 AC007663.1-201ENST00000438948 1240 ntBASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 AL049637.2-201ENST00000641778 930 ntBASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 AC060834.1-201ENST00000443027 2032 ntBASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
UBE2D4Q9Y2X8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 UNC93B2-201ENST00000285383 730 ntBASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 GXYLT1P6-201ENST00000456472 1187 ntBASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 AC233702.5-201ENST00000584107 538 ntBASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 AC010653.2-201ENST00000623505 997 ntBASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 PBK-203ENST00000522944 1499 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 UBALD1-205ENST00000590891 2641 ntBASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 AC018695.7-201ENST00000624587 2492 ntBASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
UBE2D4Q9Y2X8 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 AC105020.1-201ENST00000435356 2205 ntBASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 PCDHA14-201ENST00000506751 2298 ntBASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC12.3□□□□□ -0.44
UBE2D4Q9Y2X8 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms