Protein–RNA interactions for Protein: Q9Y223

GNE, Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase, humanhuman

Known RBP Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GNEQ9Y223 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GNEQ9Y223 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
GNEQ9Y223 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.57■□□□□ 0.72
GNEQ9Y223 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.57■□□□□ 0.72
GNEQ9Y223 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC19.57■□□□□ 0.72
GNEQ9Y223 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC19.57■□□□□ 0.72
GNEQ9Y223 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC19.57■□□□□ 0.72
GNEQ9Y223 KRT19P2-202ENST00000557173 1012 ntBASIC19.57■□□□□ 0.72
GNEQ9Y223 AL031432.2-201ENST00000566714 459 ntBASIC19.57■□□□□ 0.72
GNEQ9Y223 AL928711.1-201ENST00000570165 459 ntBASIC19.57■□□□□ 0.72
GNEQ9Y223 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC19.57■□□□□ 0.72
GNEQ9Y223 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.57■□□□□ 0.72
GNEQ9Y223 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
GNEQ9Y223 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.57■□□□□ 0.72
GNEQ9Y223 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
GNEQ9Y223 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
GNEQ9Y223 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
GNEQ9Y223 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.56■□□□□ 0.72
GNEQ9Y223 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
GNEQ9Y223 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.56■□□□□ 0.72
GNEQ9Y223 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.56■□□□□ 0.72
GNEQ9Y223 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
GNEQ9Y223 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GNEQ9Y223 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
GNEQ9Y223 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
GNEQ9Y223 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC19.56■□□□□ 0.72
GNEQ9Y223 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC19.56■□□□□ 0.72
GNEQ9Y223 RFPL4AP1-201ENST00000530883 850 ntBASIC19.56■□□□□ 0.72
GNEQ9Y223 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.56■□□□□ 0.72
GNEQ9Y223 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.56■□□□□ 0.72
GNEQ9Y223 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC19.56■□□□□ 0.72
GNEQ9Y223 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.56■□□□□ 0.72
GNEQ9Y223 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
GNEQ9Y223 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GNEQ9Y223 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
GNEQ9Y223 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.56■□□□□ 0.72
GNEQ9Y223 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
GNEQ9Y223 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.56■□□□□ 0.72
GNEQ9Y223 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.56■□□□□ 0.72
GNEQ9Y223 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.55■□□□□ 0.72
GNEQ9Y223 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 BCAR1-209ENST00000546196 1340 ntBASIC19.55■□□□□ 0.72
GNEQ9Y223 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GNEQ9Y223 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
GNEQ9Y223 CEND1P1-201ENST00000451006 455 ntBASIC19.55■□□□□ 0.72
GNEQ9Y223 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.55■□□□□ 0.72
GNEQ9Y223 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GNEQ9Y223 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC19.55■□□□□ 0.72
GNEQ9Y223 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
GNEQ9Y223 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC19.55■□□□□ 0.72
GNEQ9Y223 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
GNEQ9Y223 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
GNEQ9Y223 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
GNEQ9Y223 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
GNEQ9Y223 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 AP000974.1-201ENST00000623909 2387 ntBASIC19.54■□□□□ 0.72
GNEQ9Y223 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
GNEQ9Y223 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.54■□□□□ 0.72
GNEQ9Y223 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC19.54■□□□□ 0.72
GNEQ9Y223 CYMP-203ENST00000474680 1263 ntBASIC19.54■□□□□ 0.72
GNEQ9Y223 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
GNEQ9Y223 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms