Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 BASP1P1-201ENST00000430708 665 ntBASIC22.31■■□□□ 1.16
CCNL1Q9UK58 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 OARD1-208ENST00000469104 704 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 AC051619.7-201ENST00000568314 623 ntBASIC22.31■■□□□ 1.16
CCNL1Q9UK58 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
CCNL1Q9UK58 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 GK-202ENST00000378941 458 ntTSL 3 BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 MIR661-201ENST00000384842 89 ntBASIC22.3■■□□□ 1.16
CCNL1Q9UK58 AL671277.1-201ENST00000429656 993 ntBASIC22.3■■□□□ 1.16
CCNL1Q9UK58 AC005225.4-201ENST00000557330 545 ntBASIC22.3■■□□□ 1.16
CCNL1Q9UK58 RN7SL204P-201ENST00000582831 262 ntBASIC22.3■■□□□ 1.16
CCNL1Q9UK58 AC099522.2-201ENST00000607001 744 ntBASIC22.3■■□□□ 1.16
CCNL1Q9UK58 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCNL1Q9UK58 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 SPDYE11-202ENST00000450699 704 ntBASIC22.29■■□□□ 1.16
CCNL1Q9UK58 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 SPDYE9P-201ENST00000570642 692 ntBASIC22.29■■□□□ 1.16
CCNL1Q9UK58 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 SPDYE10P-202ENST00000612005 668 ntBASIC22.29■■□□□ 1.16
CCNL1Q9UK58 SPDYE8P-202ENST00000612377 668 ntBASIC22.29■■□□□ 1.16
CCNL1Q9UK58 AC116407.2-201ENST00000613639 860 ntBASIC22.29■■□□□ 1.16
CCNL1Q9UK58 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC22.29■■□□□ 1.16
CCNL1Q9UK58 AC009949.1-201ENST00000623048 1830 ntBASIC22.29■■□□□ 1.16
CCNL1Q9UK58 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 MIR943-201ENST00000401286 94 ntBASIC22.28■■□□□ 1.16
CCNL1Q9UK58 ACTG1P4-201ENST00000425123 1122 ntBASIC22.28■■□□□ 1.16
CCNL1Q9UK58 TSPY16P-201ENST00000449843 468 ntBASIC22.28■■□□□ 1.16
CCNL1Q9UK58 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 RPL28-209ENST00000560055 670 ntTSL 3 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 YTHDF3-AS1-201ENST00000603538 718 ntBASIC22.28■■□□□ 1.16
CCNL1Q9UK58 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCNL1Q9UK58 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCNL1Q9UK58 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC22.27■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms