Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP25Q9UHP3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP25Q9UHP3 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP25Q9UHP3 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
USP25Q9UHP3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP25Q9UHP3 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP25Q9UHP3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP25Q9UHP3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC20.27■□□□□ 0.83
USP25Q9UHP3 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 AL031432.5-201ENST00000641059 760 ntBASIC20.26■□□□□ 0.83
USP25Q9UHP3 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC20.26■□□□□ 0.83
USP25Q9UHP3 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP25Q9UHP3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 AC087499.1-201ENST00000418141 1075 ntBASIC20.25■□□□□ 0.83
USP25Q9UHP3 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 GCSHP2-201ENST00000560971 527 ntBASIC20.25■□□□□ 0.83
USP25Q9UHP3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.25■□□□□ 0.83
USP25Q9UHP3 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP25Q9UHP3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
USP25Q9UHP3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP25Q9UHP3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms