Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 BX005266.1-201ENST00000473402 457 ntBASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 AC139887.3-201ENST00000568585 713 ntBASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 MIR7706-201ENST00000613747 67 ntBASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 IL9RP2-201ENST00000423948 1312 ntBASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 SIGLEC16-201ENST00000599858 1437 ntBASIC17.12■□□□□ 0.33
CPNE7Q9UBL6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 SPDYE21P-201ENST00000413323 827 ntBASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 OR7E14P-202ENST00000530490 1290 ntBASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 AC109462.3-201ENST00000573934 613 ntBASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 AC019129.2-201ENST00000609837 1235 ntBASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 AL022326.1-202ENST00000641533 845 ntBASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 AC243591.1-201ENST00000452967 1364 ntBASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE7Q9UBL6 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 AC004817.3-201ENST00000602957 2129 ntBASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 AC132938.5-201ENST00000624980 1813 ntBASIC17.1■□□□□ 0.33
CPNE7Q9UBL6 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE7Q9UBL6 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms