Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CLCF1Q9UBD9 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCF1Q9UBD9 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CLCF1Q9UBD9 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC15.7■□□□□ 0.1
CLCF1Q9UBD9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 BICD1-207ENST00000551848 1962 ntBASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 AC138028.4-201ENST00000564984 1845 ntBASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 ABALON-201ENST00000629058 1903 ntBASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 NKTR-203ENST00000442970 646 ntTSL 2 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 MSRA-206ENST00000521209 814 ntTSL 3 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 AC107918.4-202ENST00000641623 219 ntBASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CLCF1Q9UBD9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 AC132938.5-201ENST00000624980 1813 ntBASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 LAGE3P1-201ENST00000425356 484 ntBASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 PRYP5-201ENST00000451909 266 ntBASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 SLC25A1P1-201ENST00000528351 927 ntBASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 AC008735.5-201ENST00000623544 497 ntBASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 AC116407.3-201ENST00000623905 1129 ntBASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 HLA-J-201ENST00000462773 1622 ntBASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 FUT8-AS1-201ENST00000621019 1521 ntBASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CLCF1Q9UBD9 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 KLF4P1-201ENST00000412782 1185 ntBASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 AL020989.1-201ENST00000422979 469 ntBASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.67■□□□□ 0.1
CLCF1Q9UBD9 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms