Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.83■□□□□ 0.6
CXXC1Q9P0U4 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 BASP1P1-201ENST00000430708 665 ntBASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 AC005237.2-201ENST00000434368 219 ntBASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 SLC25A24-204ENST00000569674 2357 ntBASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CXXC1Q9P0U4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 TFAMP1-201ENST00000412727 736 ntBASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 AL355306.1-201ENST00000415580 579 ntBASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 DUX4L17-201ENST00000557360 1267 ntBASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 AC099522.2-201ENST00000607001 744 ntBASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CXXC1Q9P0U4 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 MIR943-201ENST00000401286 94 ntBASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 FAM58DP-201ENST00000428076 619 ntBASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CNN2P2-201ENST00000443536 909 ntBASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CNN2P3-201ENST00000450201 906 ntBASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 GAPDHP21-201ENST00000450301 1010 ntBASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 AL136317.3-201ENST00000618497 906 ntBASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CXXC1Q9P0U4 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms