Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 AC109462.3-201ENST00000573934 613 ntBASIC18.83■□□□□ 0.6
CISHQ9NSE2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CISHQ9NSE2 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
CISHQ9NSE2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 AC012313.10-201ENST00000623509 926 ntBASIC18.82■□□□□ 0.6
CISHQ9NSE2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CISHQ9NSE2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.82■□□□□ 0.6
CISHQ9NSE2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.81■□□□□ 0.6
CISHQ9NSE2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.81■□□□□ 0.6
CISHQ9NSE2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.81■□□□□ 0.6
CISHQ9NSE2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.81■□□□□ 0.6
CISHQ9NSE2 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.81■□□□□ 0.6
CISHQ9NSE2 AL591684.3-201ENST00000605187 298 ntBASIC18.81■□□□□ 0.6
CISHQ9NSE2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.81■□□□□ 0.6
CISHQ9NSE2 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 KRT8P10-201ENST00000450021 1447 ntBASIC18.81■□□□□ 0.6
CISHQ9NSE2 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CISHQ9NSE2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 TSPY19P-201ENST00000418461 509 ntBASIC18.8■□□□□ 0.6
CISHQ9NSE2 TSPY18P-201ENST00000441642 509 ntBASIC18.8■□□□□ 0.6
CISHQ9NSE2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 AL121772.3-201ENST00000610840 674 ntBASIC18.8■□□□□ 0.6
CISHQ9NSE2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.8■□□□□ 0.6
CISHQ9NSE2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CISHQ9NSE2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms