Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 FAM8A6P-201ENST00000407496 1135 ntBASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 AC008687.5-201ENST00000593746 558 ntBASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 AC024563.2-201ENST00000603282 481 ntBASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 AC009949.1-201ENST00000623048 1830 ntBASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTPS2Q9NRF8 AC009053.2-201ENST00000563701 2365 ntBASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 TK1-205ENST00000590862 642 ntTSL 3 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CTPS2Q9NRF8 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CTPS2Q9NRF8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 AC022898.2-201ENST00000616822 1312 ntBASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 HBZP1-201ENST00000354915 429 ntBASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 FAM210CP-201ENST00000445714 574 ntBASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 LINC01238-205ENST00000567549 1107 ntBASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 HYMAI.1-201ENST00000620949 238 ntBASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
CTPS2Q9NRF8 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms